Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS04670

Experiment: P. phyto corn MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto corn MOI 1
1,079,913	-				-1.7
1,079,913	-				-0.3
1,080,120	+		BPHYT_RS04665	0.54	+0.6
1,080,221	-		BPHYT_RS04665	0.76	+0.4
1,080,682	-				-1.3
1,080,685	-				-1.5
1,080,685	-				+0.1
1,080,765	-				+0.1
1,081,030	-		BPHYT_RS04670	0.83	+0.6
1,081,190	+				+2.8
1,081,190	+				-0.3
1,081,190	+				-0.4
1,081,191	-				-0.1
1,081,191	-				+1.2
1,081,191	-				+0.3
1,081,191	-				+0.3
1,081,365	-		BPHYT_RS04675	0.34	-0.2
1,081,527	-		BPHYT_RS04675	0.59	-0.4
1,081,670	+		BPHYT_RS04675	0.81	-0.8
1,081,809	+				-0.1
1,081,810	-				-0.2
1,081,923	-				-1.0
1,082,040	-				+0.8
1,082,040	-				+1.4