Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS35540

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
3,571,313	-		BPHYT_RS35535	0.23	+0.3
3,571,484	-		BPHYT_RS35535	0.39	-1.2
3,571,599	+		BPHYT_RS35535	0.49	-0.5
3,571,600	-		BPHYT_RS35535	0.50	-0.8
3,571,766	-		BPHYT_RS35535	0.65	+0.0
3,571,766	-		BPHYT_RS35535	0.65	+1.0
3,572,138	+				-0.3
3,572,253	+		BPHYT_RS35540	0.33	+0.8
3,572,253	+		BPHYT_RS35540	0.33	+1.0
3,572,253	+		BPHYT_RS35540	0.33	+0.8
3,572,450	+				+0.7
3,572,481	+				+2.0
3,572,567	+				-0.7
3,572,598	-				+0.3
3,572,668	+				-1.4
3,572,837	+		BPHYT_RS35545	0.20	-1.8
3,573,117	-		BPHYT_RS35545	0.62	+0.3
3,573,166	-		BPHYT_RS35545	0.69	-0.3
3,573,189	+		BPHYT_RS35545	0.73	-1.0
3,573,239	+		BPHYT_RS35545	0.80	-0.2
3,573,253	+				-0.5