Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34675

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
3,384,553	-		BPHYT_RS34670	0.14	-1.0
3,384,685	+		BPHYT_RS34670	0.26	-1.7
3,384,974	+		BPHYT_RS34670	0.53	+0.2
3,385,124	-		BPHYT_RS34670	0.67	+0.7
3,385,124	-		BPHYT_RS34670	0.67	-0.2
3,385,158	-		BPHYT_RS34670	0.70	+2.0
3,385,158	-		BPHYT_RS34670	0.70	+0.1
3,385,158	-		BPHYT_RS34670	0.70	-0.1
3,385,347	+		BPHYT_RS34670	0.88	-2.4
3,385,527	+				+0.1
3,385,527	+				+0.1
3,385,716	-		BPHYT_RS34675	0.14	-1.3
3,385,716	-		BPHYT_RS34675	0.14	-3.5
3,385,716	-		BPHYT_RS34675	0.14	-2.8
3,385,761	-		BPHYT_RS34675	0.17	-1.0
3,385,761	-		BPHYT_RS34675	0.17	-0.7
3,386,089	-		BPHYT_RS34675	0.44	-0.2
3,387,053	+				-1.7
3,387,495	+				+1.5
3,387,708	-		BPHYT_RS34680	0.18	-0.3
3,387,718	-		BPHYT_RS34680	0.22	+0.3