Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34655

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
3,381,094	-		BPHYT_RS34650	0.28	-0.4
3,381,094	-		BPHYT_RS34650	0.28	-1.4
3,381,240	-		BPHYT_RS34650	0.42	-1.1
3,381,642	-		BPHYT_RS34650	0.81	-1.7
3,381,712	-		BPHYT_RS34650	0.88	-0.5
3,381,853	+				-0.4
3,381,854	-				+0.3
3,382,236	+		BPHYT_RS34655	0.32	-2.4
3,382,780	+		BPHYT_RS34655	0.78	-0.3
3,382,983	+				-0.1
3,383,035	-				+0.6
3,383,122	-				+0.2
3,383,122	-				-0.1
3,383,124	-				+2.6
3,383,124	-				+0.2
3,383,558	-		BPHYT_RS34660	0.56	+0.4
3,383,558	-				+4.4
3,383,642	+		BPHYT_RS34660	0.70	-0.7
3,383,642	+		BPHYT_RS34660	0.70	-1.5
3,383,643	-		BPHYT_RS34660	0.70	+1.0
3,383,646	+		BPHYT_RS34660	0.70	-0.2
3,383,646	+		BPHYT_RS34660	0.70	-0.4
3,383,647	-		BPHYT_RS34660	0.70	-0.2
3,383,755	+		BPHYT_RS34660	0.87	+0.9
3,383,816	+				+0.5
3,383,904	-				-1.7
3,383,906	-				-2.7
3,383,992	+		BPHYT_RS34665	0.13	+1.2
3,384,046	+		BPHYT_RS34665	0.27	-0.5
3,384,046	+		BPHYT_RS34665	0.27	-0.5
3,384,047	-		BPHYT_RS34665	0.27	-0.4