Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34490

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
3,345,541	-		BPHYT_RS34485	0.49	+0.2
3,345,541	-		BPHYT_RS34485	0.49	+0.5
3,345,592	+		BPHYT_RS34485	0.53	+1.4
3,346,251	-				+0.3
3,346,263	-				+0.6
3,346,428	-		BPHYT_RS34490	0.21	-2.2
3,346,702	-				-1.7
3,346,726	-				+0.4
3,346,742	+				-1.8
3,347,022	+		BPHYT_RS34495	0.17	+0.9
3,347,023	-		BPHYT_RS34495	0.17	+1.2
3,347,023	-		BPHYT_RS34495	0.17	-1.2
3,347,023	-		BPHYT_RS34495	0.17	-0.2
3,347,057	-		BPHYT_RS34495	0.20	-0.5
3,347,178	+		BPHYT_RS34495	0.33	-2.0
3,347,255	-		BPHYT_RS34495	0.42	-1.6
3,347,255	-		BPHYT_RS34495	0.42	+0.9
3,347,313	-		BPHYT_RS34495	0.48	+0.8
3,347,416	-		BPHYT_RS34495	0.59	-0.4
3,347,437	-		BPHYT_RS34495	0.61	-0.4
3,347,475	+		BPHYT_RS34495	0.65	+0.4