Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS30515
Experiment: P. phyto PHYTO2 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | P. phyto PHYTO2 MOI 1 |
---|---|---|---|---|---|
remove | |||||
2,404,546 | + | BPHYT_RS30510 | 0.39 | +0.2 | |
2,405,070 | + | BPHYT_RS30510 | 0.75 | +0.7 | |
2,405,924 | - | BPHYT_RS30515 | 0.24 | -0.6 | |
2,406,261 | + | BPHYT_RS30515 | 0.44 | -2.8 | |
2,406,835 | + | BPHYT_RS30515 | 0.78 | -3.0 | |
2,407,501 | + | BPHYT_RS30520 | 0.17 | -0.4 | |
2,407,502 | - | BPHYT_RS30520 | 0.17 | -0.0 | |
2,407,975 | + | BPHYT_RS30520 | 0.63 | +0.1 |
Or see this region's nucleotide sequence