Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS30220

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
2,334,577	+				-0.7
2,334,602	+				-0.2
2,334,605	+				-0.2
2,334,606	-				+1.0
2,334,606	-				-0.5
2,334,897	-		BPHYT_RS30220	0.18	-1.0
2,334,966	+		BPHYT_RS30220	0.23	-1.0
2,335,551	-		BPHYT_RS30220	0.65	-0.1
2,335,605	-		BPHYT_RS30220	0.69	-0.6
2,335,655	+		BPHYT_RS30220	0.72	-0.8
2,335,926	-				-0.7
2,335,983	+				-0.5
2,336,043	-				-0.2
2,336,043	-				+1.2
2,336,047	+				+0.4
2,336,097	-				+2.1
2,336,119	+				-0.3
2,336,422	-		BPHYT_RS30225	0.65	-1.7
2,336,427	+		BPHYT_RS30225	0.66	-0.2
2,336,464	-		BPHYT_RS30225	0.73	-2.2
2,336,524	-		BPHYT_RS30225	0.85	-1.9