Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS30055

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
2,298,276	-		BPHYT_RS30050	0.64	+0.5
2,298,347	+		BPHYT_RS30050	0.68	-1.3
2,298,348	-		BPHYT_RS30050	0.68	-0.1
2,298,544	+		BPHYT_RS30050	0.81	-0.2
2,298,545	-		BPHYT_RS30050	0.81	-1.9
2,298,545	-		BPHYT_RS30050	0.81	-0.2
2,298,941	+				-2.3
2,298,941	+				+0.6
2,299,044	-				-0.3
2,299,220	+				-0.3
2,299,220	+				-2.2
2,299,224	+				+1.9
2,299,225	-				-0.6
2,299,225	-				-0.8
2,299,257	-		BPHYT_RS30055	0.16	-0.4
2,299,280	-		BPHYT_RS30055	0.27	+0.6
2,299,309	+		BPHYT_RS30055	0.41	-2.2
2,299,427	-				-0.1
2,299,611	+				+0.8
2,299,625	+				-0.5
2,299,626	-				-1.7
2,299,638	+				+0.1
2,299,675	+		BPHYT_RS30060	0.12	+0.3
2,299,676	-		BPHYT_RS30060	0.12	+0.4
2,299,689	-		BPHYT_RS30060	0.14	+1.4
2,299,708	-		BPHYT_RS30060	0.16	-2.0
2,299,862	+		BPHYT_RS30060	0.39	-0.2
2,299,862	+		BPHYT_RS30060	0.39	-0.4
2,299,996	+		BPHYT_RS30060	0.58	-2.2
2,300,021	+		BPHYT_RS30060	0.61	-2.2
2,300,118	-		BPHYT_RS30060	0.75	-0.5
2,300,118	-		BPHYT_RS30060	0.75	+0.0