Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS29715

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
2,217,593	+		BPHYT_RS29710	0.68	+0.5
2,217,621	-		BPHYT_RS29710	0.71	-0.3
2,218,429	+		BPHYT_RS29715	0.23	-1.1
2,218,874	-		BPHYT_RS29715	0.43	+0.7
2,219,104	+		BPHYT_RS29715	0.54	-0.2
2,219,308	+		BPHYT_RS29715	0.63	+0.4
2,219,308	+		BPHYT_RS29715	0.63	+0.7
2,219,850	-		BPHYT_RS29715	0.87	+0.2
2,219,871	+		BPHYT_RS29715	0.88	+2.6
2,219,953	-				+1.1
2,220,003	+				-0.9
2,220,056	-				-0.5
2,220,107	+				-1.0
2,220,239	+				-0.5
2,220,335	-		BPHYT_RS29720	0.14	-1.0
2,220,659	+		BPHYT_RS29720	0.69	+0.1
2,220,869	-				+0.0
2,220,892	-				-0.7
2,220,946	+				+0.2
2,220,990	+				-1.2
2,221,108	-		BPHYT_RS29725	0.31	-1.7
2,221,108	-		BPHYT_RS29725	0.31	-0.4