Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS29660

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
2,206,153	-		BPHYT_RS29655	0.68	+0.8
2,206,206	+		BPHYT_RS29655	0.74	-1.1
2,206,447	+				-1.2
2,206,447	+				-0.9
2,206,448	-				+0.0
2,206,506	-				-0.5
2,206,508	+				-1.7
2,206,509	-				-0.6
2,206,509	-				-0.4
2,206,667	+		BPHYT_RS29660	0.11	+1.2
2,206,732	+		BPHYT_RS29660	0.16	+1.6
2,206,815	-		BPHYT_RS29660	0.22	-0.8
2,206,815	-		BPHYT_RS29660	0.22	+0.0
2,206,858	-		BPHYT_RS29660	0.25	+1.5
2,207,222	-		BPHYT_RS29660	0.51	-1.7
2,207,424	-		BPHYT_RS29660	0.65	+0.3
2,207,499	+		BPHYT_RS29660	0.70	+0.5
2,208,201	+		BPHYT_RS29665	0.20	-0.2
2,208,316	-		BPHYT_RS29665	0.33	+0.4
2,208,336	+		BPHYT_RS29665	0.35	-0.4
2,208,600	+		BPHYT_RS29665	0.63	+0.1
2,208,622	-		BPHYT_RS29665	0.65	-0.8
2,208,866	-				+0.7
2,208,867	+				+0.7
2,208,868	-				-2.7
2,208,875	-				-0.5