Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS29540

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
2,177,786	-		BPHYT_RS29535	0.34	-0.9
2,177,998	+		BPHYT_RS29535	0.52	-0.7
2,178,000	+		BPHYT_RS29535	0.52	-1.4
2,178,193	+		BPHYT_RS29535	0.69	-0.9
2,178,194	-		BPHYT_RS29535	0.69	+0.8
2,178,303	+		BPHYT_RS29535	0.79	-2.1
2,178,303	+		BPHYT_RS29535	0.79	+3.5
2,178,304	-		BPHYT_RS29535	0.79	-0.3
2,178,307	+		BPHYT_RS29535	0.79	+1.4
2,178,308	-		BPHYT_RS29535	0.79	-0.5
2,178,308	-		BPHYT_RS29535	0.79	+0.5
2,178,405	+		BPHYT_RS29535	0.87	-1.9
2,178,409	+		BPHYT_RS29535	0.88	+0.4
2,178,648	-				-0.3
2,179,391	-		BPHYT_RS29540	0.76	-2.9
2,179,784	-		BPHYT_RS29545	0.13	-0.6
2,179,973	+		BPHYT_RS29545	0.46	-0.2
2,180,393	+				-0.4
2,180,394	-				+0.4