Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS29365

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
2,141,412	+		BPHYT_RS29360	0.22	-0.1
2,141,908	-		BPHYT_RS29360	0.73	-0.1
2,141,985	+		BPHYT_RS29360	0.81	-1.4
2,141,986	-		BPHYT_RS29360	0.81	-0.6
2,142,042	+		BPHYT_RS29360	0.86	+1.3
2,142,140	+				-0.8
2,142,335	-		BPHYT_RS29365	0.11	+0.9
2,143,395	-				-2.1
2,143,395	-				-1.1
2,143,408	+				+0.2
2,143,408	+				-0.1
2,143,702	-				+1.0
2,144,002	-		BPHYT_RS29370	0.15	+0.3
2,144,049	+		BPHYT_RS29370	0.18	-0.2
2,144,051	+		BPHYT_RS29370	0.18	-2.7