Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS29235

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
2,114,999	-				+1.1
2,115,040	+				+1.5
2,115,436	-		BPHYT_RS29230	0.51	+1.1
2,115,442	+		BPHYT_RS29230	0.51	-0.4
2,115,442	+		BPHYT_RS29230	0.51	-0.4
2,115,991	+		BPHYT_RS29235	0.31	+1.5
2,115,991	+		BPHYT_RS29235	0.31	-0.6
2,115,992	-		BPHYT_RS29235	0.31	+2.6
2,116,456	+				-0.8
2,116,894	-				-0.6
2,116,986	+		BPHYT_RS29245	0.13	+0.3
2,116,987	-		BPHYT_RS29245	0.13	-0.7