Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS28910

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
2,033,436	-		BPHYT_RS28905	0.32	+0.6
2,035,218	+		BPHYT_RS28910	0.51	-1.1
2,035,219	-		BPHYT_RS28910	0.51	-0.7
2,035,221	+		BPHYT_RS28910	0.51	-0.1
2,036,371	+				+0.0
2,036,371	+				-1.1
2,036,372	-				-1.6
2,036,382	-				-0.7
2,036,634	+		BPHYT_RS28915	0.11	+0.3
2,036,635	-		BPHYT_RS28915	0.11	-1.0
2,036,848	-		BPHYT_RS28915	0.29	+0.2
2,037,147	+		BPHYT_RS28915	0.56	+1.5
2,037,152	-		BPHYT_RS28915	0.56	+1.3
2,037,152	-		BPHYT_RS28915	0.56	+0.5
2,037,166	+		BPHYT_RS28915	0.57	+3.4
2,037,179	+		BPHYT_RS28915	0.58	-0.4
2,037,208	-		BPHYT_RS28915	0.61	-1.2
2,037,208	-		BPHYT_RS28915	0.61	-0.2
2,037,210	+		BPHYT_RS28915	0.61	-0.5
2,037,211	-		BPHYT_RS28915	0.61	-1.2
2,037,214	+		BPHYT_RS28915	0.61	+0.4
2,037,215	-		BPHYT_RS28915	0.62	-0.8
2,037,215	-		BPHYT_RS28915	0.62	+0.3