Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS28740

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
2,000,817	-		BPHYT_RS28735	0.15	+1.6
2,000,878	+		BPHYT_RS28735	0.24	+0.0
2,000,879	-		BPHYT_RS28735	0.24	-0.3
2,001,073	-		BPHYT_RS28735	0.52	-0.1
2,001,077	-		BPHYT_RS28735	0.53	-2.2
2,001,077	-		BPHYT_RS28735	0.53	-0.7
2,001,406	+				-0.1
2,001,438	-				+0.3
2,001,480	+				-0.4
2,001,489	-				-1.2
2,001,609	+		BPHYT_RS28740	0.19	-0.2
2,001,651	-		BPHYT_RS28740	0.24	+1.6
2,001,810	+		BPHYT_RS28740	0.42	+2.3
2,002,428	+		BPHYT_RS28745	0.11	-0.1
2,002,778	-		BPHYT_RS28745	0.54	-1.1
2,002,782	-		BPHYT_RS28745	0.55	-2.3
2,002,843	+		BPHYT_RS28745	0.62	+0.3