Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS26435
Experiment: P. phyto PHYTO2 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | P. phyto PHYTO2 MOI 1 |
---|---|---|---|---|---|
remove | |||||
1,501,404 | - | BPHYT_RS26430 | 0.11 | -0.7 | |
1,501,795 | + | BPHYT_RS26430 | 0.45 | -0.5 | |
1,501,831 | + | BPHYT_RS26430 | 0.49 | -0.1 | |
1,501,888 | - | BPHYT_RS26430 | 0.53 | +0.5 | |
1,502,216 | - | BPHYT_RS26430 | 0.82 | -0.2 | |
1,502,394 | - | -0.5 | |||
1,502,942 | + | BPHYT_RS26435 | 0.77 | -1.4 | |
1,502,952 | + | BPHYT_RS26435 | 0.78 | -1.1 | |
1,503,104 | + | -0.1 | |||
1,503,777 | - | -0.4 | |||
1,503,941 | + | BPHYT_RS26440 | 0.18 | -0.1 |
Or see this region's nucleotide sequence