Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS18910

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
4,247,656	+				-0.4
4,247,656	+				+0.1
4,247,657	-				-0.9
4,247,657	-				-0.5
4,247,657	-				-2.4
4,247,666	+				+0.1
4,247,712	+				-0.2
4,247,714	+				-0.2
4,247,714	+				-0.2
4,247,714	+				+0.3
4,248,111	+				-1.1
4,248,503	-		BPHYT_RS18910	0.70	-1.1
4,248,539	+		BPHYT_RS18910	0.78	-1.1
4,248,540	-		BPHYT_RS18910	0.78	-0.7
4,248,596	+				+0.6
4,248,597	-				+0.2
4,248,775	-				-0.9
4,248,837	+				+2.5
4,248,837	+				-0.2
4,248,838	-				-0.0
4,248,896	+				+0.6
4,248,945	+				-1.6
4,249,411	+		BPHYT_RS18920	0.70	-2.6
4,249,411	+		BPHYT_RS18920	0.70	-0.3
4,249,415	+		BPHYT_RS18920	0.71	-3.0
4,249,415	+		BPHYT_RS18920	0.71	+0.2
4,249,421	+		BPHYT_RS18920	0.72	+0.1
4,249,421	+		BPHYT_RS18920	0.72	-3.3
4,249,461	+		BPHYT_RS18920	0.82	+0.5