Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS17370

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
3,937,798	-				-0.7
3,937,904	-		BPHYT_RS17370	0.48	+0.2
3,937,912	-		BPHYT_RS17370	0.53	+0.1
3,937,912	-		BPHYT_RS17370	0.53	+1.9
3,937,912	-		BPHYT_RS17370	0.53	+0.6
3,937,912	-		BPHYT_RS17370	0.53	-1.6
3,937,912	-		BPHYT_RS17370	0.53	-0.3
3,937,912	-		BPHYT_RS17370	0.53	+2.9
3,937,912	-		BPHYT_RS17370	0.53	+0.9
3,937,986	-				-1.2
3,938,056	+				+0.7
3,938,056	+				-0.7
3,938,127	+		BPHYT_RS17375	0.22	+0.4
3,938,127	+		BPHYT_RS17375	0.22	+0.1
3,938,128	-		BPHYT_RS17375	0.22	-0.5
3,938,179	-		BPHYT_RS17375	0.36	-1.7
3,938,314	+		BPHYT_RS17375	0.72	-1.1
3,938,332	-		BPHYT_RS17375	0.77	+2.2
3,938,332	-		BPHYT_RS17375	0.77	+0.7
3,938,379	+		BPHYT_RS17375	0.89	+1.0
3,938,379	+		BPHYT_RS17375	0.89	+0.8
3,938,380	-		BPHYT_RS17375	0.89	+0.3
3,938,380	-		BPHYT_RS17375	0.89	+0.3
3,938,380	-		BPHYT_RS17375	0.89	-0.5
3,938,380	-		BPHYT_RS17375	0.89	-1.9
3,938,580	-				-0.2
3,938,664	-				+0.6
3,938,823	+		BPHYT_RS17380	0.18	+0.4
3,938,823	+		BPHYT_RS17380	0.18	-0.8
3,938,823	+		BPHYT_RS17380	0.18	-1.5
3,938,823	+		BPHYT_RS17380	0.18	-0.1
3,938,824	-		BPHYT_RS17380	0.18	+0.7
3,938,824	-		BPHYT_RS17380	0.18	-0.3
3,938,824	-		BPHYT_RS17380	0.18	+0.4