Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS17185

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
3,890,496	+		BPHYT_RS17180	0.19	+1.0
3,890,496	+		BPHYT_RS17180	0.19	+0.1
3,890,497	-		BPHYT_RS17180	0.19	-1.4
3,890,497	-		BPHYT_RS17180	0.19	+0.4
3,890,517	+		BPHYT_RS17180	0.21	-2.5
3,890,517	+		BPHYT_RS17180	0.21	-0.0
3,890,517	+		BPHYT_RS17180	0.21	+2.6
3,890,610	+		BPHYT_RS17180	0.32	-0.2
3,890,610	+		BPHYT_RS17180	0.32	-0.0
3,890,611	-		BPHYT_RS17180	0.32	-0.9
3,890,611	-		BPHYT_RS17180	0.32	-2.7
3,890,631	+		BPHYT_RS17180	0.35	-0.5
3,890,631	+		BPHYT_RS17180	0.35	-0.8
3,890,632	-		BPHYT_RS17180	0.35	+0.1
3,890,632	-		BPHYT_RS17180	0.35	+0.1
3,890,632	-		BPHYT_RS17180	0.35	-0.6
3,890,632	-		BPHYT_RS17180	0.35	-0.1
3,890,632	-		BPHYT_RS17180	0.35	+0.0
3,890,668	-				-0.0
3,890,731	-		BPHYT_RS17180	0.46	+0.2
3,890,731	-		BPHYT_RS17180	0.46	+0.6
3,890,839	+		BPHYT_RS17180	0.59	-0.3
3,890,874	+		BPHYT_RS17180	0.63	+0.1
3,891,210	+				-2.3
3,891,211	-				-0.1
3,891,231	+				-2.5
3,891,232	-				+0.6
3,891,447	+		BPHYT_RS17185	0.16	-0.6
3,891,447	+		BPHYT_RS17185	0.16	-1.6
3,891,448	-		BPHYT_RS17185	0.16	+0.3
3,891,489	+		BPHYT_RS17185	0.19	+1.9
3,891,534	+		BPHYT_RS17185	0.23	+0.4
3,891,534	+		BPHYT_RS17185	0.23	+2.6
3,891,534	+		BPHYT_RS17185	0.23	+1.7
3,891,534	+		BPHYT_RS17185	0.23	+2.3
3,891,535	-		BPHYT_RS17185	0.23	-0.0
3,891,574	-		BPHYT_RS17185	0.26	+1.9
3,891,715	-		BPHYT_RS17185	0.37	+1.5
3,892,042	-		BPHYT_RS17185	0.63	+0.1
3,892,156	+				+0.2
3,892,156	+		BPHYT_RS17185	0.73	+1.4
3,892,156	+		BPHYT_RS17185	0.73	+0.6
3,892,604	+				-0.7
3,892,605	-				-0.5
3,892,605	-				+0.9
3,892,756	-				+1.3