Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS14360

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
3,277,756	-				+0.2
3,277,811	-				+0.7
3,277,870	+		BPHYT_RS14360	0.13	-2.2
3,277,871	-		BPHYT_RS14360	0.13	-0.4
3,277,975	+		BPHYT_RS14360	0.24	+0.7
3,278,122	+		BPHYT_RS14360	0.40	-0.5
3,278,122	+		BPHYT_RS14360	0.40	-1.3
3,278,122	+		BPHYT_RS14360	0.40	-0.5
3,278,123	-		BPHYT_RS14360	0.40	-0.9
3,278,123	-		BPHYT_RS14360	0.40	-0.4
3,278,188	+		BPHYT_RS14360	0.47	-0.1
3,278,422	+		BPHYT_RS14360	0.72	-0.4
3,278,423	-				+0.2
3,278,423	-		BPHYT_RS14360	0.72	-1.2
3,278,426	+		BPHYT_RS14360	0.72	-1.6
3,278,426	+		BPHYT_RS14360	0.72	-0.6
3,278,427	-		BPHYT_RS14360	0.73	-0.6
3,278,427	-		BPHYT_RS14360	0.73	-1.5
3,278,570	+		BPHYT_RS14360	0.88	+2.0
3,278,570	+		BPHYT_RS14360	0.88	-0.8
3,278,571	-		BPHYT_RS14360	0.88	+0.5
3,278,682	-				+0.8