Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS14180

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
3,237,717	-				+0.4
3,237,724	-				-0.6
3,238,059	+		BPHYT_RS14175	0.37	-2.4
3,238,060	-		BPHYT_RS14175	0.37	-0.1
3,238,060	-		BPHYT_RS14175	0.37	-0.5
3,238,103	+		BPHYT_RS14175	0.45	+1.1
3,238,104	-		BPHYT_RS14175	0.45	-0.1
3,238,390	-				-1.0
3,238,502	+				+1.3
3,238,503	-				+1.0
3,238,649	+		BPHYT_RS14180	0.22	-0.8
3,238,695	-		BPHYT_RS14180	0.31	+2.8
3,238,753	-		BPHYT_RS14180	0.42	+1.0
3,238,983	-		BPHYT_RS14180	0.87	-1.0
3,239,074	+				-0.0
3,239,074	+				+0.3
3,239,075	-				+0.5
3,239,095	+				+2.5
3,239,231	-		BPHYT_RS14185	0.34	-0.7
3,239,544	-				-0.9
3,239,554	-				+0.6
3,239,554	-				+0.3
3,239,590	-				-1.1
3,239,657	-				+1.1
3,239,669	+				+1.0
3,239,670	-				-0.0
3,239,670	-				-2.1
3,239,696	+				+1.5
3,239,722	+				+0.5
3,239,796	-				+2.5
3,239,798	+				+1.5
3,239,799	-				+2.5
3,239,799	-				+0.2
3,239,939	-				-0.6