Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS10430

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
2,370,020	+		BPHYT_RS10425	0.26	+1.3
2,370,021	-		BPHYT_RS10425	0.26	-1.9
2,370,159	+		BPHYT_RS10425	0.43	-2.4
2,370,419	+		BPHYT_RS10425	0.74	-0.3
2,370,507	+		BPHYT_RS10425	0.85	-1.8
2,370,508	-		BPHYT_RS10425	0.85	+0.5
2,370,527	+		BPHYT_RS10425	0.87	+0.4
2,370,596	+				+0.4
2,370,597	-				-0.5
2,370,659	-				+0.7
2,370,674	-				+0.5
2,370,689	-				-0.8
2,371,277	-		BPHYT_RS10430	0.58	+0.8
2,371,372	+		BPHYT_RS10430	0.66	+1.8
2,371,603	-		BPHYT_RS10430	0.87	+0.4
2,371,868	-				-1.5
2,371,984	-				-0.3
2,372,158	-				+0.7
2,372,265	+				-0.3
2,372,365	+				+0.3
2,372,366	-		BPHYT_RS10435	0.10	-2.6
2,372,459	-		BPHYT_RS10435	0.25	-0.3
2,372,571	-		BPHYT_RS10435	0.43	+0.1
2,372,640	+		BPHYT_RS10435	0.54	+0.9