Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09805

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
2,226,930	+				-0.7
2,227,030	+				+0.8
2,227,227	-				+1.1
2,227,347	+		BPHYT_RS09800	0.41	-1.8
2,227,541	+				+0.6
2,227,541	+				+0.9
2,227,624	+				-0.0
2,227,668	+				+1.4
2,227,789	+				-0.1
2,227,963	-		BPHYT_RS09805	0.21	-1.8
2,228,082	+		BPHYT_RS09805	0.36	+1.5
2,228,091	+		BPHYT_RS09805	0.37	-0.2
2,228,092	-		BPHYT_RS09805	0.37	+1.0
2,228,157	+		BPHYT_RS09805	0.45	+3.1
2,228,232	+		BPHYT_RS09805	0.55	+0.2
2,228,236	-		BPHYT_RS09805	0.55	+2.8
2,228,237	+		BPHYT_RS09805	0.56	-0.6
2,228,238	-		BPHYT_RS09805	0.56	-3.2
2,228,495	-		BPHYT_RS09805	0.88	+0.8
2,228,548	-				+0.8
2,228,548	-				-0.4
2,228,691	-		BPHYT_RS09810	0.42	+0.5
2,228,762	+		BPHYT_RS09810	0.73	-0.6
2,228,762	+		BPHYT_RS09810	0.73	-0.6
2,228,802	-				-0.7