Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09705

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
2,197,918	-		BPHYT_RS09700	0.61	-1.2
2,197,960	-		BPHYT_RS09700	0.65	-0.3
2,197,960	-		BPHYT_RS09700	0.65	+0.9
2,197,960	-		BPHYT_RS09700	0.65	-2.1
2,198,056	-		BPHYT_RS09700	0.73	-2.0
2,198,532	-				-0.8
2,198,646	-				-0.0
2,198,646	-				-1.5
2,198,672	+		BPHYT_RS09705	0.10	-2.8
2,199,295	+		BPHYT_RS09705	0.50	-1.3
2,199,296	-		BPHYT_RS09705	0.50	-1.2
2,199,296	-		BPHYT_RS09705	0.50	-0.3
2,199,297	+		BPHYT_RS09705	0.50	+1.1
2,199,298	-		BPHYT_RS09705	0.50	-3.5
2,199,903	+		BPHYT_RS09705	0.89	-0.5
2,200,298	-				+0.8
2,200,423	+				+1.8
2,200,871	+		BPHYT_RS09710	0.12	+2.5
2,200,899	-		BPHYT_RS09710	0.14	-0.9
2,201,009	+		BPHYT_RS09710	0.22	-1.2