Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09590

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
2,175,167	+				-1.9
2,175,167	+				-0.1
2,175,260	+				-0.8
2,175,261	-				-1.0
2,175,267	-				-0.1
2,175,267	-				-0.6
2,175,286	-				-0.5
2,175,286	-				+0.3
2,175,413	+		BPHYT_RS09585	0.16	+3.6
2,175,621	+				+2.8
2,175,715	+		BPHYT_RS09585	0.88	+0.9
2,175,832	+				+1.8
2,176,194	+				+1.2
2,176,299	+		BPHYT_RS09590	0.28	-0.1
2,176,300	-		BPHYT_RS09590	0.28	-1.9
2,176,495	+		BPHYT_RS09590	0.68	-0.7
2,176,495	+		BPHYT_RS09590	0.68	-1.3
2,176,561	+				+1.7
2,176,562	-		BPHYT_RS09590	0.82	-0.1
2,176,911	+		BPHYT_RS09595	0.15	-0.4
2,176,912	-		BPHYT_RS09595	0.15	-0.1
2,176,945	-		BPHYT_RS09595	0.18	-0.0
2,177,376	+		BPHYT_RS09595	0.61	-0.7
2,177,376	+		BPHYT_RS09595	0.61	-1.4
2,177,597	+		BPHYT_RS09595	0.83	-2.6
2,177,597	+		BPHYT_RS09595	0.83	+0.4