Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS07425

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
1,687,059	-				+0.3
1,687,138	+		BPHYT_RS07415	0.13	-1.8
1,687,138	+		BPHYT_RS07415	0.13	-1.0
1,687,138	+		BPHYT_RS07415	0.13	-0.9
1,687,139	-		BPHYT_RS07415	0.13	-0.4
1,687,435	-				+2.0
1,687,572	-		BPHYT_RS07420	0.70	+0.8
1,688,010	-				-1.4
1,688,099	-		BPHYT_RS07425	0.21	+1.6
1,688,360	-		BPHYT_RS07425	0.54	-0.2
1,688,718	-				+0.9
1,688,718	-				+2.1
1,688,723	+				-1.5
1,688,724	-				+0.2
1,688,724	-				+0.2
1,688,872	+				+0.1
1,688,872	+				-1.7
1,688,872	+				-0.9
1,688,872	+				+0.1
1,688,873	-				-0.4
1,689,213	+		BPHYT_RS07430	0.23	-1.8
1,689,214	-		BPHYT_RS07430	0.23	+1.0
1,689,245	-		BPHYT_RS07430	0.25	-0.8