Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS06810

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
1,539,254	+		BPHYT_RS06805	0.64	-0.4
1,539,255	-		BPHYT_RS06805	0.64	+0.0
1,539,255	-		BPHYT_RS06805	0.64	+0.8
1,539,366	-		BPHYT_RS06805	0.73	-0.1
1,539,366	-		BPHYT_RS06805	0.73	+0.5
1,539,528	+		BPHYT_RS06805	0.87	+1.2
1,539,528	+		BPHYT_RS06805	0.87	+0.4
1,539,529	-		BPHYT_RS06805	0.87	-0.2
1,539,529	-		BPHYT_RS06805	0.87	+0.8
1,539,717	+				-0.3
1,539,717	+				+0.1
1,539,718	-				+0.5
1,539,719	+				+1.2
1,539,719	+				+0.9
1,539,720	-				-0.3
1,539,720	-				+1.3
1,539,720	-				+0.6
1,539,720	-				-0.0
1,539,773	+				+0.3
1,539,829	+				-0.4
1,539,849	+				+0.2
1,539,849	+				+0.2
1,539,849	+				+0.4
1,539,849	+				-0.2
1,539,849	+				-1.1
1,539,849	+				+1.7
1,539,850	-				+0.7
1,539,850	-				-1.4
1,539,850	-				+1.3
1,539,850	-				+0.7
1,539,850	-				-2.3
1,539,851	+				+1.2
1,539,852	-				+2.6
1,539,880	+				-0.9
1,539,880	+				+1.2
1,539,880	+				-0.5
1,539,881	-				+0.6
1,539,881	-				+0.2
1,539,882	+				+0.4
1,539,883	-				+1.4
1,539,914	+				+0.5
1,539,915	-				+0.0
1,539,915	-				-0.3
1,540,008	+				-0.9
1,540,008	+				-0.2
1,540,008	+				+1.2
1,540,081	+		BPHYT_RS06810	0.11	+0.8
1,540,081	+		BPHYT_RS06810	0.11	-2.9
1,540,082	-		BPHYT_RS06810	0.11	+1.6
1,540,083	+		BPHYT_RS06810	0.11	+0.1
1,540,083	+		BPHYT_RS06810	0.11	+0.5
1,540,084	-		BPHYT_RS06810	0.12	+1.3
1,540,084	-		BPHYT_RS06810	0.12	+0.8
1,540,084	-		BPHYT_RS06810	0.12	+1.6
1,540,084	-		BPHYT_RS06810	0.12	-0.7
1,540,084	-		BPHYT_RS06810	0.12	+1.3
1,540,315	-		BPHYT_RS06810	0.32	+0.1
1,540,341	+		BPHYT_RS06810	0.34	+0.4
1,540,347	+		BPHYT_RS06810	0.35	-0.3
1,540,348	-		BPHYT_RS06810	0.35	+0.9
1,540,378	-		BPHYT_RS06810	0.38	+0.3
1,540,428	+		BPHYT_RS06810	0.42	-0.6
1,540,481	-		BPHYT_RS06810	0.47	-1.0
1,540,530	+		BPHYT_RS06810	0.51	-0.6
1,540,552	+		BPHYT_RS06810	0.53	-0.0
1,540,573	-		BPHYT_RS06810	0.55	+0.4
1,540,757	-		BPHYT_RS06810	0.72	-0.1
1,540,860	+		BPHYT_RS06810	0.81	-1.4
1,540,861	-		BPHYT_RS06810	0.81	-0.1
1,540,889	+		BPHYT_RS06810	0.83	+2.8
1,540,889	+		BPHYT_RS06810	0.83	+0.6
1,540,889	+		BPHYT_RS06810	0.83	-0.2
1,540,889	+		BPHYT_RS06810	0.83	-0.4
1,540,890	-		BPHYT_RS06810	0.84	+1.6
1,540,890	-		BPHYT_RS06810	0.84	-0.7
1,540,893	+		BPHYT_RS06810	0.84	+0.2
1,540,893	+		BPHYT_RS06810	0.84	-0.2
1,540,963	+				-0.2
1,540,963	+				+0.0
1,540,964	-				-1.6
1,540,964	-				+0.9
1,540,964	-				+0.5
1,540,965	+				-1.0
1,540,965	+				+0.0
1,540,965	+				+0.5
1,540,965	+				-1.6
1,540,965	+				+1.2
1,540,965	+				+1.0
1,540,966	-				-0.2
1,540,966	-				+0.6
1,540,966	-				-1.3
1,541,075	+				-1.1
1,541,076	-				+0.0