Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS06255

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
1,426,692	+				+0.2
1,426,693	-				-0.1
1,426,693	-				-0.7
1,426,693	-				-0.6
1,426,844	+				+1.3
1,426,845	-				+0.3
1,427,066	-		BPHYT_RS06250	0.28	-0.4
1,427,120	+		BPHYT_RS06250	0.36	+1.0
1,427,121	-		BPHYT_RS06250	0.36	-0.0
1,427,257	-		BPHYT_RS06250	0.54	-0.4
1,427,736	+		BPHYT_RS06255	0.24	-1.1
1,427,781	-		BPHYT_RS06255	0.33	-2.3
1,427,781	-		BPHYT_RS06255	0.33	-1.1
1,428,022	-		BPHYT_RS06255	0.79	-0.5
1,428,186	+				-0.1
1,428,205	+				-0.0
1,428,343	+				-0.0
1,428,417	+				-0.1
1,428,460	-				-0.9
1,428,484	+				+0.8
1,428,558	+				-0.2
1,428,558	+				-0.2
1,428,716	+				-1.5
1,428,789	+		BPHYT_RS06260	0.14	-2.4
1,428,790	-		BPHYT_RS06260	0.14	-0.3
1,428,820	+		BPHYT_RS06260	0.17	-1.5
1,428,914	-		BPHYT_RS06260	0.25	-0.5
1,429,069	+		BPHYT_RS06260	0.37	-2.3
1,429,070	-		BPHYT_RS06260	0.38	-1.5