Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS05365

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
1,233,573	+		BPHYT_RS05360	0.36	-1.4
1,233,574	-		BPHYT_RS05360	0.36	-0.1
1,233,630	-		BPHYT_RS05360	0.40	+0.7
1,233,633	+		BPHYT_RS05360	0.41	-1.4
1,233,787	-		BPHYT_RS05360	0.52	-0.1
1,233,885	+		BPHYT_RS05360	0.60	+0.9
1,233,885	+		BPHYT_RS05360	0.60	-0.1
1,233,888	-		BPHYT_RS05360	0.60	-0.4
1,234,215	-		BPHYT_RS05360	0.85	-1.7
1,234,448	-				-0.7
1,234,643	-				-0.8
1,234,949	-		BPHYT_RS05365	0.50	+0.8
1,235,315	+				-1.1
1,235,368	-				-0.6
1,235,417	+				-1.2
1,235,417	+				-1.0
1,235,502	-				-0.8
1,235,502	-				-1.2
1,235,502	-				-1.9
1,236,213	+		BPHYT_RS05370	0.58	-2.0