Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS05190

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
1,193,469	-		BPHYT_RS05185	0.45	-1.3
1,193,584	+		BPHYT_RS05185	0.54	-0.1
1,193,585	-		BPHYT_RS05185	0.54	-0.5
1,193,590	+		BPHYT_RS05185	0.54	+0.7
1,193,590	+		BPHYT_RS05185	0.54	-0.5
1,193,590	+		BPHYT_RS05185	0.54	-1.4
1,193,590	+		BPHYT_RS05185	0.54	+1.1
1,193,591	-		BPHYT_RS05185	0.54	-1.1
1,193,591	-		BPHYT_RS05185	0.54	-0.6
1,193,591	-		BPHYT_RS05185	0.54	-1.5
1,193,717	+		BPHYT_RS05185	0.63	-0.2
1,193,795	-		BPHYT_RS05185	0.68	-1.3
1,193,938	+		BPHYT_RS05185	0.78	-0.5
1,194,103	+				-0.1
1,194,127	+				-1.2
1,194,253	-				+0.5
1,194,253	-				-0.5
1,194,253	-				+0.5
1,194,274	+				-0.8
1,194,294	+				+0.3
1,194,321	-				-1.6
1,194,321	-				-3.0
1,194,345	-				-0.0
1,194,345	-				+1.0
1,194,366	+				+0.5
1,194,747	-		BPHYT_RS05190	0.29	+1.8
1,194,747	-		BPHYT_RS05190	0.29	+1.7
1,194,839	+		BPHYT_RS05190	0.38	+2.4
1,194,840	-		BPHYT_RS05190	0.38	-0.1
1,194,925	-		BPHYT_RS05190	0.46	+2.3
1,195,231	-		BPHYT_RS05190	0.77	+1.3
1,195,337	+		BPHYT_RS05190	0.87	+0.7
1,195,406	+				-2.6
1,195,554	-				+0.4
1,195,768	-				-2.8
1,195,809	-				+0.2
1,195,835	+				-0.3
1,195,981	+				-2.7
1,196,056	+				-0.9
1,196,056	+				+0.2
1,196,057	-				-0.1
1,196,135	+				+1.4
1,196,274	-				+1.2
1,196,276	+				+0.4
1,196,276	+				-0.4
1,196,291	+				-0.5
1,196,294	+				-2.0