Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS04860

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
1,118,842	-		BPHYT_RS04855	0.31	-1.3
1,118,845	+		BPHYT_RS04855	0.31	-1.5
1,118,846	-		BPHYT_RS04855	0.32	-1.2
1,118,854	+		BPHYT_RS04855	0.32	+0.2
1,118,965	+		BPHYT_RS04855	0.43	+0.1
1,118,966	-		BPHYT_RS04855	0.43	-0.4
1,118,966	-		BPHYT_RS04855	0.43	-3.8
1,119,069	-		BPHYT_RS04855	0.53	-0.5
1,119,289	+		BPHYT_RS04855	0.74	-1.6
1,119,291	+		BPHYT_RS04855	0.74	-0.4
1,119,292	-				+0.6
1,119,292	-		BPHYT_RS04855	0.74	-0.2
1,119,664	+		BPHYT_RS04860	0.12	-0.7
1,119,664	+		BPHYT_RS04860	0.12	-1.8
1,119,672	-		BPHYT_RS04860	0.13	-1.6
1,120,165	+		BPHYT_RS04860	0.71	+0.8
1,120,282	+				+1.6
1,120,542	-				+0.1
1,121,208	+		BPHYT_RS04865	0.71	-1.6
1,121,209	-		BPHYT_RS04865	0.71	+0.7
1,121,310	+		BPHYT_RS04865	0.81	+1.0
1,121,311	-		BPHYT_RS04865	0.81	+0.0