Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS36480

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
104,986	+				-0.7
105,113	-				-0.9
105,210	+				-0.4
105,213	+				-1.3
105,279	-				-1.6
105,368	-		BPHYT_RS36475	0.18	+0.3
105,462	-		BPHYT_RS36475	0.37	-0.1
105,617	+		BPHYT_RS36475	0.68	+1.5
105,618	-		BPHYT_RS36475	0.68	+0.3
106,166	+		BPHYT_RS36480	0.40	-1.5
106,167	-		BPHYT_RS36480	0.40	-0.0
106,248	-				+0.9
106,261	-		BPHYT_RS36480	0.54	-0.4
106,442	-		BPHYT_RS36480	0.81	+2.9
106,551	-				-1.1
106,829	-		BPHYT_RS36485	0.38	-2.3
106,920	-		BPHYT_RS36485	0.55	-1.2
107,027	+		BPHYT_RS36485	0.75	+0.9
107,065	-		BPHYT_RS36485	0.83	+0.8
107,352	-				-0.7
107,352	-				+0.9