Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS35355

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
3,530,536	-		BPHYT_RS35350	0.69	-1.8
3,530,599	-		BPHYT_RS35350	0.76	-0.4
3,530,709	+		BPHYT_RS35350	0.88	-0.2
3,530,709	+		BPHYT_RS35350	0.88	-2.7
3,530,709	+		BPHYT_RS35350	0.88	-0.3
3,531,150	-		BPHYT_RS35355	0.35	+1.6
3,531,194	+		BPHYT_RS35355	0.39	+0.9
3,531,384	-		BPHYT_RS35355	0.59	+1.5
3,531,404	-		BPHYT_RS35355	0.61	+2.4
3,531,438	-		BPHYT_RS35355	0.65	+0.5
3,531,540	-		BPHYT_RS35355	0.75	-0.2
3,531,540	-				-0.4
3,531,595	-		BPHYT_RS35355	0.81	-0.3
3,531,666	-		BPHYT_RS35355	0.89	+0.3
3,531,964	+				+0.8
3,531,977	+				-1.1
3,532,004	+				-0.8
3,532,694	-		BPHYT_RS35360	0.76	+1.5