Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33230

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
3,034,695	-				-0.4
3,034,756	-				+0.1
3,034,828	-				-1.6
3,034,877	+				-1.5
3,034,878	-				-0.8
3,034,997	+				+0.8
3,034,997	+				-2.6
3,034,998	-				-1.1
3,034,998	-				+0.9
3,034,998	-				-1.9
3,035,159	-				+0.0
3,035,252	+				+2.3
3,035,252	+				-0.4
3,035,477	+				-0.9
3,035,521	-				-0.4
3,035,521	-				-1.5
3,035,532	-				+0.2
3,035,619	+				-0.2
3,035,619	+				-1.9
3,035,619	+				+1.3
3,035,623	+				-0.5
3,035,822	-		BPHYT_RS33230	0.17	-0.9
3,035,910	+		BPHYT_RS33230	0.23	-2.3
3,036,000	+		BPHYT_RS33230	0.30	-1.6
3,036,727	-		BPHYT_RS33230	0.79	-2.8
3,036,732	+		BPHYT_RS33230	0.80	-1.0
3,037,012	-				-1.5
3,037,435	-		BPHYT_RS33235	0.10	+0.7
3,037,506	+		BPHYT_RS33235	0.14	-1.7
3,037,812	+		BPHYT_RS33235	0.30	+0.8
3,037,925	+		BPHYT_RS33235	0.36	+0.3
3,037,925	+		BPHYT_RS33235	0.36	+0.3
3,037,939	-		BPHYT_RS33235	0.36	+0.2