Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS32105

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
2,777,114	+				-0.1
2,777,287	+				-0.3
2,777,339	+				+2.2
2,777,784	+				+0.0
2,777,785	-				-2.9
2,778,030	-		BPHYT_RS32105	0.32	+0.8
2,778,066	+		BPHYT_RS32105	0.42	+2.1
2,778,067	-		BPHYT_RS32105	0.42	+0.4
2,778,173	-		BPHYT_RS32105	0.70	+1.3
2,778,194	-		BPHYT_RS32105	0.76	-0.5
2,778,213	+		BPHYT_RS32105	0.81	-0.0
2,778,214	-		BPHYT_RS32105	0.81	-0.2
2,778,275	+				-0.5
2,778,276	-				+0.5
2,778,278	-				+0.5
2,778,416	-		BPHYT_RS32110	0.34	-1.4
2,778,480	-		BPHYT_RS32110	0.54	-0.0
2,778,638	-				-0.2
2,778,645	+				+0.9
2,778,646	-				+1.0
2,778,646	-				+1.4
2,778,663	+				-0.1
2,779,037	-		BPHYT_RS32115	0.41	-0.0
2,779,042	-		BPHYT_RS32115	0.42	-0.8
2,779,224	+		BPHYT_RS32115	0.79	-1.8
2,779,279	-				+0.7
2,779,282	+				+0.1