Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31225

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
2,563,514	-		BPHYT_RS31220	0.48	-0.2
2,563,667	-		BPHYT_RS31220	0.62	-1.9
2,563,724	-		BPHYT_RS31220	0.67	-0.6
2,563,757	-		BPHYT_RS31220	0.70	-1.6
2,563,757	-		BPHYT_RS31220	0.70	+0.4
2,563,874	-		BPHYT_RS31220	0.81	+0.5
2,563,875	+		BPHYT_RS31220	0.81	-0.1
2,563,969	+		BPHYT_RS31220	0.89	-0.3
2,563,970	-		BPHYT_RS31220	0.89	-0.6
2,564,038	-				-3.4
2,564,145	+				-0.6
2,564,146	-				-1.0
2,564,237	+				+0.2
2,564,238	-				-0.5
2,564,399	+				+0.1
2,564,400	-				-0.2
2,564,400	-				-1.9
2,564,400	-				-0.3
2,564,401	+				-1.0
2,564,453	+				+0.1
2,564,606	-		BPHYT_RS31225	0.18	+2.5
2,564,606	-		BPHYT_RS31225	0.18	+1.9
2,564,711	-		BPHYT_RS31225	0.36	-0.7
2,564,764	+		BPHYT_RS31225	0.46	+1.6
2,564,940	-		BPHYT_RS31225	0.77	+0.5
2,565,123	-				+1.1
2,565,317	+		BPHYT_RS31230	0.11	+0.6
2,565,328	+		BPHYT_RS31230	0.12	-0.9
2,565,328	+		BPHYT_RS31230	0.12	-0.7
2,565,632	+		BPHYT_RS31230	0.31	-2.3
2,565,770	+		BPHYT_RS31230	0.40	-0.3
2,566,011	-		BPHYT_RS31230	0.55	+0.0
2,566,011	-		BPHYT_RS31230	0.55	-0.1