Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31140

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
2,541,157	+		BPHYT_RS31135	0.29	-2.4
2,541,158	-		BPHYT_RS31135	0.29	-0.5
2,541,296	-		BPHYT_RS31135	0.40	-0.5
2,541,312	+		BPHYT_RS31135	0.41	+0.3
2,541,576	-		BPHYT_RS31135	0.62	-0.5
2,541,576	-		BPHYT_RS31135	0.62	+0.2
2,541,755	+		BPHYT_RS31135	0.76	+1.1
2,541,805	-		BPHYT_RS31135	0.79	-3.0
2,542,015	+				-0.4
2,542,015	+				+1.7
2,542,016	-				-0.0
2,542,016	-				-0.2
2,542,110	+				+0.6
2,542,111	-				+0.7
2,542,525	+		BPHYT_RS31140	0.31	+0.5
2,542,526	-		BPHYT_RS31140	0.31	+0.8
2,542,526	-		BPHYT_RS31140	0.31	-1.1
2,542,637	-		BPHYT_RS31140	0.39	+0.6
2,543,029	+		BPHYT_RS31140	0.69	-0.6
2,543,089	+		BPHYT_RS31140	0.73	-0.8
2,543,090	-		BPHYT_RS31140	0.73	-2.3
2,543,221	+		BPHYT_RS31140	0.83	+0.3
2,543,255	-		BPHYT_RS31140	0.86	+1.1
2,543,326	+				-0.2
2,543,327	-				+0.7
2,543,571	-				-0.4
2,543,621	-				+1.5
2,543,682	+				-1.3
2,543,703	-				-2.1
2,543,754	-				-0.5
2,543,904	-		BPHYT_RS31145	0.19	-1.8
2,543,953	-		BPHYT_RS31145	0.23	+0.8
2,544,047	+		BPHYT_RS31145	0.30	-1.1
2,544,250	+		BPHYT_RS31145	0.46	+0.8