Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31135

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
2,539,786	+		BPHYT_RS31125	0.10	+0.1
2,539,787	-		BPHYT_RS31125	0.11	-1.0
2,539,888	-		BPHYT_RS31125	0.33	+0.6
2,540,212	-				-0.5
2,540,328	+		BPHYT_RS31130	0.19	-0.1
2,540,433	-		BPHYT_RS31130	0.71	-0.3
2,540,433	-		BPHYT_RS31130	0.71	+0.4
2,540,434	+		BPHYT_RS31130	0.71	-3.3
2,540,492	+				+1.5
2,540,492	+				+0.3
2,540,560	-				-1.0
2,540,597	+				+1.0
2,541,066	-		BPHYT_RS31135	0.22	-0.3
2,541,157	+		BPHYT_RS31135	0.29	-2.4
2,541,158	-		BPHYT_RS31135	0.29	-0.5
2,541,296	-		BPHYT_RS31135	0.40	-0.5
2,541,312	+		BPHYT_RS31135	0.41	+0.3
2,541,576	-		BPHYT_RS31135	0.62	-0.5
2,541,576	-		BPHYT_RS31135	0.62	+0.2
2,541,755	+		BPHYT_RS31135	0.76	+1.1
2,541,805	-		BPHYT_RS31135	0.79	-3.0
2,542,015	+				-0.4
2,542,015	+				+1.7
2,542,016	-				-0.0
2,542,016	-				-0.2
2,542,110	+				+0.6
2,542,111	-				+0.7
2,542,525	+		BPHYT_RS31140	0.31	+0.5
2,542,526	-		BPHYT_RS31140	0.31	+0.8
2,542,526	-		BPHYT_RS31140	0.31	-1.1
2,542,637	-		BPHYT_RS31140	0.39	+0.6
2,543,029	+		BPHYT_RS31140	0.69	-0.6