Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS29805

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
2,238,642	+				-1.8
2,238,671	-				-0.5
2,238,705	+				-1.2
2,238,706	-				+0.8
2,238,708	+				-0.5
2,238,708	+				+0.4
2,238,712	+				-2.1
2,238,712	+				-1.0
2,238,713	-				+0.9
2,238,899	+		BPHYT_RS29800	0.14	-0.7
2,239,301	+		BPHYT_RS29800	0.88	-0.7
2,239,484	-				-0.3
2,239,970	+		BPHYT_RS29805	0.79	-0.6
2,239,971	-		BPHYT_RS29805	0.79	-1.0
2,239,989	-		BPHYT_RS29805	0.82	-0.7
2,240,314	-		BPHYT_RS29810	0.48	+0.7
2,240,546	+				+1.2
2,240,547	-				-1.8
2,240,996	+		BPHYT_RS29815	0.57	+0.2