Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS26585

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
1,532,630	-				+0.6
1,532,694	+				-0.1
1,532,738	+				+2.1
1,532,738	+				-1.5
1,532,822	+				-0.5
1,532,822	+				+0.3
1,532,822	+				-1.9
1,533,347	+		BPHYT_RS26585	0.21	-0.6
1,533,348	-		BPHYT_RS26585	0.21	+1.1
1,533,539	+		BPHYT_RS26585	0.33	-0.4
1,533,774	-		BPHYT_RS26585	0.47	-0.2
1,533,954	-		BPHYT_RS26585	0.57	-2.4
1,534,187	+		BPHYT_RS26585	0.71	-3.0
1,534,208	+		BPHYT_RS26585	0.73	-1.2
1,534,374	-		BPHYT_RS26585	0.82	-2.9
1,534,514	+				-0.5
1,534,514	+				+1.8
1,534,938	+		BPHYT_RS26590	0.29	-0.4
1,534,957	+		BPHYT_RS26590	0.32	-1.6
1,534,957	+		BPHYT_RS26590	0.32	-0.1
1,534,958	-		BPHYT_RS26590	0.32	+0.2
1,535,091	+		BPHYT_RS26590	0.53	-0.6
1,535,092	-		BPHYT_RS26590	0.54	-0.6
1,535,285	-		BPHYT_RS26590	0.85	+0.5
1,535,285	-		BPHYT_RS26590	0.85	-1.5
1,535,508	+				-0.6
1,535,547	+				-1.1