Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS25725

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
1,343,327	-				-0.1
1,343,331	-				-3.1
1,343,347	+				+0.1
1,343,390	-				-1.0
1,343,444	+				+0.1
1,343,676	-		BPHYT_RS25720	0.12	+0.8
1,343,680	-		BPHYT_RS25720	0.13	-0.5
1,343,879	+		BPHYT_RS25720	0.52	-2.7
1,343,879	+		BPHYT_RS25720	0.52	+0.7
1,343,879	+		BPHYT_RS25720	0.52	-0.3
1,343,920	-		BPHYT_RS25720	0.60	+0.3
1,344,123	-				-2.5
1,344,123	-				+0.0
1,344,408	+		BPHYT_RS25725	0.39	-1.7
1,344,535	+				+1.2
1,344,800	-				-1.1
1,345,253	+		BPHYT_RS25730	0.24	+0.2
1,345,312	+		BPHYT_RS25730	0.26	-1.7
1,345,663	-		BPHYT_RS25730	0.41	-1.5
1,345,663	-		BPHYT_RS25730	0.41	-0.9