Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS19610

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
4,413,848	+		BPHYT_RS19605	0.38	-0.0
4,413,849	-		BPHYT_RS19605	0.38	-1.2
4,413,900	-		BPHYT_RS19605	0.42	-0.2
4,413,953	+		BPHYT_RS19605	0.47	-0.1
4,413,953	+		BPHYT_RS19605	0.47	-0.6
4,413,953	+		BPHYT_RS19605	0.47	-0.3
4,413,954	-		BPHYT_RS19605	0.47	-0.2
4,413,954	-		BPHYT_RS19605	0.47	-2.3
4,413,954	-		BPHYT_RS19605	0.47	-0.2
4,414,091	+		BPHYT_RS19605	0.58	-0.5
4,414,091	+		BPHYT_RS19605	0.58	+0.1
4,414,092	-		BPHYT_RS19605	0.58	-0.3
4,414,092	-		BPHYT_RS19605	0.58	+0.6
4,414,188	-		BPHYT_RS19605	0.66	+1.3
4,414,598	+				-0.6
4,414,686	+				-0.5
4,414,687	-				+0.1
4,414,931	+		BPHYT_RS19610	0.62	-1.1
4,415,022	+		BPHYT_RS19610	0.84	-1.8
4,415,102	-				-0.4
4,415,102	-				+0.2
4,415,108	+				+0.6
4,415,169	-				+0.1
4,415,262	+				-0.4
4,415,262	+				-1.5
4,415,262	+				-0.4
4,415,263	-				-0.3
4,415,833	+				-1.3
4,415,833	+				-1.4
4,415,834	-				-2.7