Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16090

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
3,650,733	-				-1.4
3,650,735	+				+1.3
3,650,735	+				+0.3
3,650,736	-				+3.1
3,650,941	+		BPHYT_RS16085	0.27	-1.8
3,651,150	-		BPHYT_RS16085	0.49	-0.9
3,651,150	-		BPHYT_RS16085	0.49	-0.3
3,651,361	+		BPHYT_RS16085	0.72	-0.4
3,651,656	-				-1.4
3,651,766	+		BPHYT_RS16090	0.38	-1.2
3,651,767	-		BPHYT_RS16090	0.38	-3.4
3,651,941	-				-0.2
3,652,034	+				+0.0
3,652,116	-				-1.9
3,652,116	-				-0.3
3,652,116	-				+0.1
3,652,183	+		BPHYT_RS16095	0.16	-0.2
3,652,553	-		BPHYT_RS16095	0.49	-1.4
3,652,840	+		BPHYT_RS16095	0.75	-1.5
3,652,859	-		BPHYT_RS16095	0.77	-3.1