Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS10935

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
2,487,716	+		BPHYT_RS10925	0.86	-2.1
2,487,717	-		BPHYT_RS10925	0.86	-0.4
2,487,881	+				-0.1
2,487,917	+				-0.6
2,488,175	-		BPHYT_RS10930	0.28	-1.9
2,488,353	+		BPHYT_RS10930	0.58	+0.4
2,488,366	+		BPHYT_RS10930	0.60	+2.1
2,488,542	+		BPHYT_RS10930	0.89	+0.9
2,488,543	-		BPHYT_RS10930	0.90	+1.6
2,488,635	+				-1.1
2,488,639	+				-0.1
2,489,323	-		BPHYT_RS10935	0.63	+1.9
2,490,082	+		BPHYT_RS10940	0.14	-1.5
2,490,082	+		BPHYT_RS10940	0.14	-0.9
2,490,083	-		BPHYT_RS10940	0.14	+1.5
2,490,083	-		BPHYT_RS10940	0.14	-1.2
2,490,083	-		BPHYT_RS10940	0.14	+0.6
2,490,091	-		BPHYT_RS10940	0.15	-1.1
2,490,581	-		BPHYT_RS10940	0.73	-2.5
2,490,586	+		BPHYT_RS10940	0.74	+1.7