Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09205
Experiment: P. phyto PHYTO2 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | P. phyto PHYTO2 MOI 1 |
---|---|---|---|---|---|
remove | |||||
2,083,489 | + | BPHYT_RS09205 | 0.19 | -0.3 | |
2,083,507 | + | BPHYT_RS09205 | 0.20 | -3.0 | |
2,083,717 | - | BPHYT_RS09205 | 0.37 | -1.0 | |
2,084,530 | + | -0.3 | |||
2,084,531 | - | +2.0 | |||
2,084,619 | - | -0.4 | |||
2,084,699 | + | -1.0 | |||
2,084,852 | - | BPHYT_RS09210 | 0.21 | -2.6 | |
2,084,852 | - | BPHYT_RS09210 | 0.21 | -0.7 | |
2,084,969 | - | BPHYT_RS09210 | 0.33 | +0.6 | |
2,085,004 | + | BPHYT_RS09210 | 0.37 | +0.2 | |
2,085,004 | + | BPHYT_RS09210 | 0.37 | -0.0 | |
2,085,124 | - | BPHYT_RS09210 | 0.49 | -0.1 | |
2,085,271 | + | BPHYT_RS09210 | 0.63 | -1.3 | |
2,085,271 | + | BPHYT_RS09210 | 0.63 | -0.4 |
Or see this region's nucleotide sequence