Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS04760

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
1,098,530	-		BPHYT_RS04755	0.28	+0.1
1,098,530	-		BPHYT_RS04755	0.28	-0.3
1,098,530	-		BPHYT_RS04755	0.28	-2.7
1,098,686	-		BPHYT_RS04755	0.43	-0.1
1,099,003	+		BPHYT_RS04755	0.74	-0.2
1,099,003	+		BPHYT_RS04755	0.74	+0.9
1,099,004	-		BPHYT_RS04755	0.74	+1.4
1,099,225	+				+0.1
1,099,338	+				-0.1
1,099,339	-				-1.4
1,099,346	+				+0.7
1,099,349	+				+0.4
1,099,350	-				+0.6
1,099,425	+				+0.3
1,099,425	+				-0.1
1,099,813	+		BPHYT_RS04760	0.44	+0.0
1,099,814	-		BPHYT_RS04760	0.44	-0.7
1,099,849	-		BPHYT_RS04760	0.48	+0.6
1,099,849	-		BPHYT_RS04760	0.48	+0.9
1,099,937	-		BPHYT_RS04760	0.57	+1.4
1,099,937	-		BPHYT_RS04760	0.57	+0.6
1,100,188	+		BPHYT_RS04760	0.84	-0.2
1,100,189	-		BPHYT_RS04760	0.84	+0.3
1,100,420	-				-0.3
1,100,420	-				+0.3
1,100,420	-				-0.3
1,100,490	-				-0.9
1,100,502	-				+0.7
1,100,529	+				+1.0
1,100,529	+				+0.1
1,100,778	+		BPHYT_RS04765	0.26	-1.1
1,100,778	+		BPHYT_RS04765	0.26	+0.3
1,100,835	+		BPHYT_RS04765	0.30	-0.4
1,100,835	+		BPHYT_RS04765	0.30	-2.6
1,100,835	+		BPHYT_RS04765	0.30	+0.0
1,100,835	+		BPHYT_RS04765	0.30	-0.4
1,100,836	-		BPHYT_RS04765	0.30	+0.4
1,100,836	-		BPHYT_RS04765	0.30	-0.7
1,100,837	+		BPHYT_RS04765	0.30	-0.6
1,100,838	-		BPHYT_RS04765	0.30	-1.7
1,101,202	-		BPHYT_RS04765	0.57	+0.9