Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS04620

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
1,069,120	+		BPHYT_RS04615	0.28	-0.3
1,069,374	-		BPHYT_RS04615	0.56	-0.0
1,069,456	+		BPHYT_RS04615	0.66	-0.0
1,069,520	+		BPHYT_RS04615	0.73	+1.3
1,069,521	-		BPHYT_RS04615	0.73	-1.3
1,069,580	+		BPHYT_RS04615	0.80	+0.3
1,070,094	-		BPHYT_RS04620	0.32	-0.5
1,070,199	-		BPHYT_RS04620	0.47	-1.3
1,070,224	+		BPHYT_RS04620	0.50	-1.5
1,070,225	-		BPHYT_RS04620	0.51	-0.2
1,070,225	-		BPHYT_RS04620	0.51	-0.4
1,070,329	+		BPHYT_RS04620	0.66	-1.2
1,070,330	-		BPHYT_RS04620	0.66	+0.2
1,070,445	-		BPHYT_RS04620	0.82	+0.8
1,070,540	-				+0.5
1,070,540	-				+0.1
1,070,562	+				-0.1
1,070,562	+				-0.3
1,070,614	-				-1.0
1,071,163	-		BPHYT_RS04625	0.65	-1.9
1,071,331	-		BPHYT_RS04625	0.84	+1.3