Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS00755

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
172,158	-				-2.8
172,171	-				+1.0
172,171	-				-0.1
172,171	-				-1.3
172,171	-				+1.3
172,318	+		BPHYT_RS00750	0.56	+0.2
172,319	-		BPHYT_RS00750	0.57	-0.2
172,482	+				-1.5
172,504	+				-1.4
172,505	-				-2.3
172,505	-				-1.1
172,507	+				-0.7
172,508	-				-1.3
172,508	-				-0.8
172,508	-				+0.3
172,508	-				+0.6
172,695	+				-0.2
172,695	+				-0.3
172,696	-				+1.1
172,703	+				-0.2
172,754	-				+1.2
172,754	-				+0.6
172,830	+				+0.3
172,830	+				-1.2
172,830	+				+0.4
173,069	+		BPHYT_RS00755	0.12	-1.7
173,069	+		BPHYT_RS00755	0.12	+0.0
173,069	+		BPHYT_RS00755	0.12	-0.1
173,070	-		BPHYT_RS00755	0.12	-0.3
173,070	-		BPHYT_RS00755	0.12	+0.6
173,180	+		BPHYT_RS00755	0.25	-1.1
173,372	+		BPHYT_RS00755	0.47	-1.4
173,373	-		BPHYT_RS00755	0.47	+0.1
173,446	+		BPHYT_RS00755	0.55	-0.3
173,446	+		BPHYT_RS00755	0.55	-0.5
173,447	-		BPHYT_RS00755	0.55	+1.1
173,447	-		BPHYT_RS00755	0.55	-0.6
173,643	+		BPHYT_RS00755	0.78	+0.1
173,644	-		BPHYT_RS00755	0.78	-0.8
174,023	+		BPHYT_RS00760	0.33	+0.0
174,254	+		BPHYT_RS00760	0.73	-0.5
174,254	+		BPHYT_RS00760	0.73	+1.0
174,309	-		BPHYT_RS00760	0.82	+0.6
174,336	-		BPHYT_RS00760	0.87	-0.2
174,336	-		BPHYT_RS00760	0.87	+1.3
174,515	-		BPHYT_RS00765	0.16	-2.3
174,613	+		BPHYT_RS00765	0.30	+0.1
174,614	-		BPHYT_RS00765	0.30	+0.0
174,635	+		BPHYT_RS00765	0.33	-0.6
174,806	-		BPHYT_RS00765	0.59	-1.4
174,806	-		BPHYT_RS00765	0.59	-0.7