Experiment: Xanthosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS03700 and PFLU_RS03705 overlap by 4 nucleotides PFLU_RS03705 and PFLU_RS03710 overlap by 4 nucleotides PFLU_RS03710 and PFLU_RS03715 overlap by 8 nucleotides
PFLU_RS03700: PFLU_RS03700 - FAD-dependent oxidoreductase, at 846,155 to 847,402
_RS03700
PFLU_RS03705: PFLU_RS03705 - SDR family NAD(P)-dependent oxidoreductase, at 847,399 to 848,181
_RS03705
PFLU_RS03710: PFLU_RS03710 - nuclear transport factor 2 family protein, at 848,178 to 848,600
_RS03710
PFLU_RS03715: PFLU_RS03715 - deoxyribodipyrimidine photo-lyase, at 848,593 to 850,038
_RS03715
Position (kb) 848
849 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 847.212 kb on + strand, within PFLU_RS03700 at 847.212 kb on + strand, within PFLU_RS03700 at 847.212 kb on + strand, within PFLU_RS03700 at 847.247 kb on + strand, within PFLU_RS03700 at 847.247 kb on + strand, within PFLU_RS03700 at 847.248 kb on - strand, within PFLU_RS03700 at 847.255 kb on - strand, within PFLU_RS03700 at 847.261 kb on + strand, within PFLU_RS03700 at 847.261 kb on + strand, within PFLU_RS03700 at 847.262 kb on - strand, within PFLU_RS03700 at 847.262 kb on - strand, within PFLU_RS03700 at 847.291 kb on + strand at 847.353 kb on + strand at 847.353 kb on + strand at 847.353 kb on + strand at 847.354 kb on - strand at 847.354 kb on - strand at 847.354 kb on - strand at 847.354 kb on - strand at 847.354 kb on - strand at 847.354 kb on - strand at 847.354 kb on - strand at 847.501 kb on - strand, within PFLU_RS03705 at 847.554 kb on + strand, within PFLU_RS03705 at 847.554 kb on + strand, within PFLU_RS03705 at 847.554 kb on + strand, within PFLU_RS03705 at 847.555 kb on - strand, within PFLU_RS03705 at 847.555 kb on - strand, within PFLU_RS03705 at 847.555 kb on - strand, within PFLU_RS03705 at 847.660 kb on - strand, within PFLU_RS03705 at 847.700 kb on + strand, within PFLU_RS03705 at 847.701 kb on - strand, within PFLU_RS03705 at 847.727 kb on + strand, within PFLU_RS03705 at 847.727 kb on + strand, within PFLU_RS03705 at 847.727 kb on + strand, within PFLU_RS03705 at 847.727 kb on + strand, within PFLU_RS03705 at 847.727 kb on + strand, within PFLU_RS03705 at 847.728 kb on - strand, within PFLU_RS03705 at 847.754 kb on + strand, within PFLU_RS03705 at 847.755 kb on - strand, within PFLU_RS03705 at 847.755 kb on - strand, within PFLU_RS03705 at 847.755 kb on - strand, within PFLU_RS03705 at 847.755 kb on - strand, within PFLU_RS03705 at 847.755 kb on - strand, within PFLU_RS03705 at 847.755 kb on - strand, within PFLU_RS03705 at 847.755 kb on - strand, within PFLU_RS03705 at 847.755 kb on - strand, within PFLU_RS03705 at 847.832 kb on + strand, within PFLU_RS03705 at 847.832 kb on + strand, within PFLU_RS03705 at 847.832 kb on + strand, within PFLU_RS03705 at 847.832 kb on + strand, within PFLU_RS03705 at 847.832 kb on + strand, within PFLU_RS03705 at 847.833 kb on - strand, within PFLU_RS03705 at 847.904 kb on + strand, within PFLU_RS03705 at 847.904 kb on + strand, within PFLU_RS03705 at 847.904 kb on + strand, within PFLU_RS03705 at 847.904 kb on + strand, within PFLU_RS03705 at 847.904 kb on + strand, within PFLU_RS03705 at 847.904 kb on + strand, within PFLU_RS03705 at 847.904 kb on + strand, within PFLU_RS03705 at 847.904 kb on + strand, within PFLU_RS03705 at 847.904 kb on + strand, within PFLU_RS03705 at 847.904 kb on + strand, within PFLU_RS03705 at 847.904 kb on + strand, within PFLU_RS03705 at 847.905 kb on - strand, within PFLU_RS03705 at 847.905 kb on - strand, within PFLU_RS03705 at 847.905 kb on - strand, within PFLU_RS03705 at 847.905 kb on - strand, within PFLU_RS03705 at 847.905 kb on - strand, within PFLU_RS03705 at 847.905 kb on - strand, within PFLU_RS03705 at 847.905 kb on - strand, within PFLU_RS03705 at 847.905 kb on - strand, within PFLU_RS03705 at 848.020 kb on + strand, within PFLU_RS03705 at 848.020 kb on + strand, within PFLU_RS03705 at 848.020 kb on + strand, within PFLU_RS03705 at 848.020 kb on + strand, within PFLU_RS03705 at 848.020 kb on + strand, within PFLU_RS03705 at 848.020 kb on + strand, within PFLU_RS03705 at 848.020 kb on + strand, within PFLU_RS03705 at 848.021 kb on - strand, within PFLU_RS03705 at 848.021 kb on - strand, within PFLU_RS03705 at 848.021 kb on - strand, within PFLU_RS03705 at 848.021 kb on - strand, within PFLU_RS03705 at 848.021 kb on - strand, within PFLU_RS03705 at 848.021 kb on - strand, within PFLU_RS03705 at 848.236 kb on + strand, within PFLU_RS03710 at 848.236 kb on + strand, within PFLU_RS03710 at 848.237 kb on - strand, within PFLU_RS03710 at 848.237 kb on - strand, within PFLU_RS03710 at 848.237 kb on - strand, within PFLU_RS03710 at 848.237 kb on - strand, within PFLU_RS03710 at 848.260 kb on + strand, within PFLU_RS03710 at 848.260 kb on + strand, within PFLU_RS03710 at 848.260 kb on + strand, within PFLU_RS03710 at 848.261 kb on - strand, within PFLU_RS03710 at 848.261 kb on - strand, within PFLU_RS03710 at 848.276 kb on - strand, within PFLU_RS03710 at 848.276 kb on - strand, within PFLU_RS03710 at 848.374 kb on + strand, within PFLU_RS03710 at 848.375 kb on - strand, within PFLU_RS03710 at 848.441 kb on - strand, within PFLU_RS03710 at 848.455 kb on + strand, within PFLU_RS03710 at 848.456 kb on - strand, within PFLU_RS03710 at 848.456 kb on - strand, within PFLU_RS03710 at 848.521 kb on + strand, within PFLU_RS03710 at 848.521 kb on + strand, within PFLU_RS03710 at 848.521 kb on + strand, within PFLU_RS03710 at 848.600 kb on + strand at 848.600 kb on + strand at 848.601 kb on - strand at 848.601 kb on - strand at 848.601 kb on - strand at 848.601 kb on - strand at 848.601 kb on - strand at 848.601 kb on - strand at 848.737 kb on + strand at 848.737 kb on + strand at 848.737 kb on + strand at 848.737 kb on + strand at 848.737 kb on + strand at 848.737 kb on + strand at 848.737 kb on + strand at 848.737 kb on + strand at 848.737 kb on + strand at 848.737 kb on + strand at 848.737 kb on + strand at 848.738 kb on - strand, within PFLU_RS03715 at 848.738 kb on - strand, within PFLU_RS03715 at 848.738 kb on - strand, within PFLU_RS03715 at 848.738 kb on - strand, within PFLU_RS03715 at 848.738 kb on - strand, within PFLU_RS03715 at 848.738 kb on - strand, within PFLU_RS03715 at 848.738 kb on - strand, within PFLU_RS03715 at 848.738 kb on - strand, within PFLU_RS03715 at 848.738 kb on - strand, within PFLU_RS03715 at 848.843 kb on + strand, within PFLU_RS03715 at 848.844 kb on - strand, within PFLU_RS03715 at 848.844 kb on - strand, within PFLU_RS03715 at 848.844 kb on - strand, within PFLU_RS03715 at 848.928 kb on + strand, within PFLU_RS03715 at 848.929 kb on - strand, within PFLU_RS03715 at 849.185 kb on + strand, within PFLU_RS03715 at 849.185 kb on + strand, within PFLU_RS03715 at 849.185 kb on + strand, within PFLU_RS03715 at 849.185 kb on + strand, within PFLU_RS03715 at 849.185 kb on + strand, within PFLU_RS03715 at 849.185 kb on + strand, within PFLU_RS03715 at 849.185 kb on + strand, within PFLU_RS03715 at 849.186 kb on - strand, within PFLU_RS03715 at 849.186 kb on - strand, within PFLU_RS03715 at 849.186 kb on - strand, within PFLU_RS03715 at 849.186 kb on - strand, within PFLU_RS03715 at 849.186 kb on - strand, within PFLU_RS03715 at 849.186 kb on - strand, within PFLU_RS03715 at 849.186 kb on - strand, within PFLU_RS03715 at 849.186 kb on - strand, within PFLU_RS03715 at 849.219 kb on + strand, within PFLU_RS03715 at 849.220 kb on - strand, within PFLU_RS03715 at 849.220 kb on - strand, within PFLU_RS03715 at 849.220 kb on - strand, within PFLU_RS03715 at 849.315 kb on - strand, within PFLU_RS03715 at 849.315 kb on - strand, within PFLU_RS03715 at 849.368 kb on + strand, within PFLU_RS03715 at 849.368 kb on + strand, within PFLU_RS03715 at 849.368 kb on + strand, within PFLU_RS03715 at 849.368 kb on + strand, within PFLU_RS03715 at 849.368 kb on + strand, within PFLU_RS03715 at 849.368 kb on + strand, within PFLU_RS03715 at 849.368 kb on + strand, within PFLU_RS03715 at 849.368 kb on + strand, within PFLU_RS03715 at 849.368 kb on + strand, within PFLU_RS03715 at 849.368 kb on + strand, within PFLU_RS03715 at 849.368 kb on + strand, within PFLU_RS03715 at 849.368 kb on + strand, within PFLU_RS03715 at 849.368 kb on + strand, within PFLU_RS03715 at 849.368 kb on + strand, within PFLU_RS03715 at 849.368 kb on + strand, within PFLU_RS03715 at 849.369 kb on + strand, within PFLU_RS03715 at 849.369 kb on - strand, within PFLU_RS03715 at 849.369 kb on - strand, within PFLU_RS03715 at 849.369 kb on - strand, within PFLU_RS03715 at 849.369 kb on - strand, within PFLU_RS03715 at 849.369 kb on - strand, within PFLU_RS03715 at 849.369 kb on - strand, within PFLU_RS03715 at 849.369 kb on - strand, within PFLU_RS03715 at 849.369 kb on - strand, within PFLU_RS03715 at 849.369 kb on - strand, within PFLU_RS03715 at 849.369 kb on - strand, within PFLU_RS03715 at 849.369 kb on - strand, within PFLU_RS03715 at 849.369 kb on - strand, within PFLU_RS03715 at 849.369 kb on - strand, within PFLU_RS03715 at 849.369 kb on - strand, within PFLU_RS03715 at 849.369 kb on - strand, within PFLU_RS03715 at 849.371 kb on + strand, within PFLU_RS03715 at 849.371 kb on + strand, within PFLU_RS03715 at 849.372 kb on - strand, within PFLU_RS03715 at 849.372 kb on - strand, within PFLU_RS03715 at 849.569 kb on + strand, within PFLU_RS03715 at 849.569 kb on + strand, within PFLU_RS03715 at 849.570 kb on - strand, within PFLU_RS03715 at 849.570 kb on - strand, within PFLU_RS03715
Per-strain Table
Position Strand Gene LocusTag Fraction Xanthosine (C) remove 847,212 + PFLU_RS03700 0.85 -2.6 847,212 + PFLU_RS03700 0.85 -1.6 847,212 + PFLU_RS03700 0.85 +4.3 847,247 + PFLU_RS03700 0.88 -2.4 847,247 + PFLU_RS03700 0.88 -2.1 847,248 - PFLU_RS03700 0.88 +2.0 847,255 - PFLU_RS03700 0.88 +0.1 847,261 + PFLU_RS03700 0.89 -1.0 847,261 + PFLU_RS03700 0.89 -2.8 847,262 - PFLU_RS03700 0.89 -1.4 847,262 - PFLU_RS03700 0.89 +3.6 847,291 + -1.4 847,353 + -0.1 847,353 + -1.6 847,353 + +4.8 847,354 - +3.9 847,354 - +2.8 847,354 - +0.1 847,354 - +2.1 847,354 - +1.9 847,354 - +2.0 847,354 - -1.4 847,501 - PFLU_RS03705 0.13 -1.9 847,554 + PFLU_RS03705 0.20 -1.4 847,554 + PFLU_RS03705 0.20 +3.0 847,554 + PFLU_RS03705 0.20 -2.1 847,555 - PFLU_RS03705 0.20 +4.7 847,555 - PFLU_RS03705 0.20 +0.7 847,555 - PFLU_RS03705 0.20 +0.6 847,660 - PFLU_RS03705 0.33 +2.4 847,700 + PFLU_RS03705 0.38 +1.0 847,701 - PFLU_RS03705 0.39 +2.9 847,727 + PFLU_RS03705 0.42 -1.0 847,727 + PFLU_RS03705 0.42 -2.0 847,727 + PFLU_RS03705 0.42 -1.2 847,727 + PFLU_RS03705 0.42 -1.2 847,727 + PFLU_RS03705 0.42 -1.4 847,728 - PFLU_RS03705 0.42 -1.4 847,754 + PFLU_RS03705 0.45 -2.6 847,755 - PFLU_RS03705 0.45 -1.1 847,755 - PFLU_RS03705 0.45 -0.9 847,755 - PFLU_RS03705 0.45 -3.6 847,755 - PFLU_RS03705 0.45 +0.6 847,755 - PFLU_RS03705 0.45 +1.9 847,755 - PFLU_RS03705 0.45 -1.8 847,755 - PFLU_RS03705 0.45 +2.9 847,755 - PFLU_RS03705 0.45 -0.3 847,832 + PFLU_RS03705 0.55 +0.1 847,832 + PFLU_RS03705 0.55 +1.5 847,832 + PFLU_RS03705 0.55 +1.7 847,832 + PFLU_RS03705 0.55 +1.6 847,832 + PFLU_RS03705 0.55 -3.1 847,833 - PFLU_RS03705 0.55 +1.6 847,904 + PFLU_RS03705 0.64 -0.7 847,904 + PFLU_RS03705 0.64 +1.1 847,904 + PFLU_RS03705 0.64 +1.1 847,904 + PFLU_RS03705 0.64 -3.2 847,904 + PFLU_RS03705 0.64 -2.2 847,904 + PFLU_RS03705 0.64 +0.3 847,904 + PFLU_RS03705 0.64 +2.7 847,904 + PFLU_RS03705 0.64 -1.9 847,904 + PFLU_RS03705 0.64 +0.3 847,904 + PFLU_RS03705 0.64 +1.1 847,904 + PFLU_RS03705 0.64 -1.7 847,905 - PFLU_RS03705 0.65 +0.3 847,905 - PFLU_RS03705 0.65 +3.3 847,905 - PFLU_RS03705 0.65 +1.6 847,905 - PFLU_RS03705 0.65 -0.4 847,905 - PFLU_RS03705 0.65 +0.6 847,905 - PFLU_RS03705 0.65 +0.6 847,905 - PFLU_RS03705 0.65 -0.9 847,905 - PFLU_RS03705 0.65 -1.9 848,020 + PFLU_RS03705 0.79 +2.2 848,020 + PFLU_RS03705 0.79 +2.1 848,020 + PFLU_RS03705 0.79 -3.3 848,020 + PFLU_RS03705 0.79 +0.4 848,020 + PFLU_RS03705 0.79 -1.8 848,020 + PFLU_RS03705 0.79 +0.1 848,020 + PFLU_RS03705 0.79 -0.4 848,021 - PFLU_RS03705 0.79 -2.6 848,021 - PFLU_RS03705 0.79 +3.2 848,021 - PFLU_RS03705 0.79 -1.6 848,021 - PFLU_RS03705 0.79 -0.7 848,021 - PFLU_RS03705 0.79 +1.7 848,021 - PFLU_RS03705 0.79 -0.6 848,236 + PFLU_RS03710 0.14 -2.2 848,236 + PFLU_RS03710 0.14 +1.1 848,237 - PFLU_RS03710 0.14 -1.9 848,237 - PFLU_RS03710 0.14 -1.7 848,237 - PFLU_RS03710 0.14 +2.0 848,237 - PFLU_RS03710 0.14 +1.0 848,260 + PFLU_RS03710 0.19 -2.3 848,260 + PFLU_RS03710 0.19 +1.4 848,260 + PFLU_RS03710 0.19 +0.1 848,261 - PFLU_RS03710 0.20 -3.3 848,261 - PFLU_RS03710 0.20 -1.9 848,276 - PFLU_RS03710 0.23 -0.0 848,276 - PFLU_RS03710 0.23 -0.2 848,374 + PFLU_RS03710 0.46 +3.5 848,375 - PFLU_RS03710 0.47 -0.5 848,441 - PFLU_RS03710 0.62 -2.1 848,455 + PFLU_RS03710 0.65 -2.4 848,456 - PFLU_RS03710 0.66 -1.0 848,456 - PFLU_RS03710 0.66 -2.3 848,521 + PFLU_RS03710 0.81 +0.4 848,521 + PFLU_RS03710 0.81 -1.9 848,521 + PFLU_RS03710 0.81 -0.7 848,600 + -0.9 848,600 + +0.4 848,601 - -1.3 848,601 - +4.4 848,601 - +1.3 848,601 - -1.0 848,601 - -1.6 848,601 - -0.7 848,737 + -2.3 848,737 + -1.8 848,737 + -0.1 848,737 + -2.8 848,737 + -2.6 848,737 + -1.7 848,737 + -0.4 848,737 + -0.2 848,737 + -1.6 848,737 + +0.1 848,737 + +0.4 848,738 - PFLU_RS03715 0.10 +2.1 848,738 - PFLU_RS03715 0.10 +0.4 848,738 - PFLU_RS03715 0.10 -3.2 848,738 - PFLU_RS03715 0.10 -1.6 848,738 - PFLU_RS03715 0.10 +0.6 848,738 - PFLU_RS03715 0.10 +2.2 848,738 - PFLU_RS03715 0.10 +2.6 848,738 - PFLU_RS03715 0.10 -2.0 848,738 - PFLU_RS03715 0.10 -3.0 848,843 + PFLU_RS03715 0.17 +3.8 848,844 - PFLU_RS03715 0.17 -1.3 848,844 - PFLU_RS03715 0.17 -0.4 848,844 - PFLU_RS03715 0.17 +0.2 848,928 + PFLU_RS03715 0.23 +1.8 848,929 - PFLU_RS03715 0.23 -3.0 849,185 + PFLU_RS03715 0.41 -1.4 849,185 + PFLU_RS03715 0.41 -1.9 849,185 + PFLU_RS03715 0.41 +1.0 849,185 + PFLU_RS03715 0.41 -2.3 849,185 + PFLU_RS03715 0.41 -2.0 849,185 + PFLU_RS03715 0.41 -1.0 849,185 + PFLU_RS03715 0.41 -0.8 849,186 - PFLU_RS03715 0.41 +2.5 849,186 - PFLU_RS03715 0.41 -1.0 849,186 - PFLU_RS03715 0.41 -0.5 849,186 - PFLU_RS03715 0.41 +1.5 849,186 - PFLU_RS03715 0.41 +1.3 849,186 - PFLU_RS03715 0.41 +1.3 849,186 - PFLU_RS03715 0.41 -2.2 849,186 - PFLU_RS03715 0.41 -0.6 849,219 + PFLU_RS03715 0.43 +2.7 849,220 - PFLU_RS03715 0.43 +0.7 849,220 - PFLU_RS03715 0.43 +2.9 849,220 - PFLU_RS03715 0.43 -2.9 849,315 - PFLU_RS03715 0.50 -1.3 849,315 - PFLU_RS03715 0.50 -1.3 849,368 + PFLU_RS03715 0.54 -2.2 849,368 + PFLU_RS03715 0.54 +0.6 849,368 + PFLU_RS03715 0.54 -1.2 849,368 + PFLU_RS03715 0.54 +1.1 849,368 + PFLU_RS03715 0.54 -2.3 849,368 + PFLU_RS03715 0.54 +1.3 849,368 + PFLU_RS03715 0.54 -1.4 849,368 + PFLU_RS03715 0.54 -2.0 849,368 + PFLU_RS03715 0.54 +0.6 849,368 + PFLU_RS03715 0.54 -1.9 849,368 + PFLU_RS03715 0.54 -0.7 849,368 + PFLU_RS03715 0.54 +1.9 849,368 + PFLU_RS03715 0.54 +1.7 849,368 + PFLU_RS03715 0.54 -1.3 849,368 + PFLU_RS03715 0.54 +2.7 849,369 + PFLU_RS03715 0.54 +1.1 849,369 - PFLU_RS03715 0.54 -1.3 849,369 - PFLU_RS03715 0.54 +1.4 849,369 - PFLU_RS03715 0.54 -1.6 849,369 - PFLU_RS03715 0.54 +1.4 849,369 - PFLU_RS03715 0.54 +0.4 849,369 - PFLU_RS03715 0.54 +2.7 849,369 - PFLU_RS03715 0.54 -2.5 849,369 - PFLU_RS03715 0.54 -0.9 849,369 - PFLU_RS03715 0.54 -1.0 849,369 - PFLU_RS03715 0.54 +0.6 849,369 - PFLU_RS03715 0.54 +2.1 849,369 - PFLU_RS03715 0.54 -1.0 849,369 - PFLU_RS03715 0.54 -0.1 849,369 - PFLU_RS03715 0.54 +2.0 849,369 - PFLU_RS03715 0.54 +1.0 849,371 + PFLU_RS03715 0.54 -2.3 849,371 + PFLU_RS03715 0.54 +0.9 849,372 - PFLU_RS03715 0.54 -2.2 849,372 - PFLU_RS03715 0.54 -2.6 849,569 + PFLU_RS03715 0.67 -2.0 849,569 + PFLU_RS03715 0.67 +1.8 849,570 - PFLU_RS03715 0.68 +0.6 849,570 - PFLU_RS03715 0.68 -1.9
Or see this region's nucleotide sequence