Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS30115

Experiment: Inosine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPFLU_RS30110 and PFLU_RS30115 are separated by 123 nucleotidesPFLU_RS30115 and PFLU_RS30120 are separated by 44 nucleotides PFLU_RS30110: PFLU_RS30110 - UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase, at 6,700,422 to 6,701,789 _RS30110 PFLU_RS30115: PFLU_RS30115 - F0F1 ATP synthase subunit epsilon, at 6,701,913 to 6,702,329 _RS30115 PFLU_RS30120: PFLU_RS30120 - F0F1 ATP synthase subunit beta, at 6,702,374 to 6,703,750 _RS30120 Position (kb) 6701 6702 6703Strain fitness (log2 ratio) -1 0 1at 6701.915 kb on - strandat 6701.915 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Inosine (C)
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6,701,915 - -0.5
6,701,915 - +0.2

Or see this region's nucleotide sequence